
Single-cell analysis, made simple
OMIQ is a modern cytometry analysis platform that bridges the world of machine learning and analytical
pipelines with that of classical manual analysis. It allows researchers to complete their entire workflow in
one software, going from raw data to statistical
significance, using their own expertise and familiar tools seamlessly blended with dozens of cutting-edge
computational methods and visualizations to unlock deeper insights from data.
The OMIQ Advantage

Shrink time to result
Use a single software to go from raw data to statistical significance, and everything in between. Complete
your analysis in days, not months.

Be a data leader
End reliance on bioinformatics staff. Elevate your skills and career with cutting-edge analytics and
visualization.

Collaborate with ease
Choose permission levels and add colleagues with a click. Get to results faster, together.

Auditable and reproducible
All analysis in OMIQ is stored as a traceable sequence of steps called a Workflow. Workflows can be locked
for safekeeping. Never wonder how a result was obtained.

Secure by design
Your data are safe with OMIQ's enterprise-grade security, including end-to-end and at-rest encryption, and
organizational security-in-depth.

Customizable
With plugins, your code can run inside OMIQ. Share your algorithms with the world or keep them
private for your enterprise only.
OMIQ Fundamentals
There is a lot to know about OMIQ. Let's start with the basics.
Flexible Data Input
Flexible Data Input
FCS, CSV, LMD. Regardless of your input format, OMIQ will accept it. Clinical and experimental
metadata can be cross-referenced manually or automatically to help OMIQ extract the insights that matter.
Classic Analysis Options
Classic Analysis Options
OMIQ has you covered for your classic manual analysis needs. Use convenient functionality for
adjusting compensation, setting scales, gating, making figures, processing visual and/or statistical batch
reports, and more.
Reproducible Workflows

Reproducible Workflows
Every analysis is a sequence of operations on data. That sequence can be hard to track, trace, and
audit, especially when moving data between multiple software packages. OMIQ Workflows solve this problem by
allowing any sequence of operations on data to be executed and viewed in a single software platform. Workflows
can be built dynamically or loaded from templates.
Fully Supported

Fully Supported
Get support seven days a week through email, phone, and video chat. OMIQ support staff can help with software
questions and also offer professional-level advice on analytics.
High-Dimensional Power
Use OMIQ's suite of machine learning tools to bring order to complex high-dimensional data.
OMIQ's modular architecture ensures that you have access to the latest and greatest analytical innovations,
as they happen. All algorithms in OMIQ are available natively and do not require installation of additional
plugins or software.
Dimensionality Reduction

Dimensionality Reduction
Dimensionality reduction is a mainstay of high-dimensional analysis. Run t-SNE, UMAP, PCA, EmbedSOM, FIt-SNE,
TriMap, and more. Use opt-SNE to remove the guesswork with settings and get great results every time. Take
advantage of GPU-accelerated processing options to get results over 100x faster in some cases.
Clustering
Clustering
Categorize data into populations automatically with FlowSOM, Phenograph, PARC, SPADE, ClusterX, and more.
Use graph analysis or heatmaps to deepen your understanding of stucture and patterns within data.
Statistical Differential Analysis
Statistical Differential Analysis
Cut through the noise and find what matters. OMIQ has visualizations
and statistical methods to find the strongest stratifying signals aligned with clinical or
experimental metadata.
Trajectory Inference

Trajectory Inference
Discover and visualize paths of cellular development. Understand differentation switch points and cell
fate.
Automated Data Cleaning

Automated Data Cleaning
Everything starts with clean data. Incorporate algorithms such as flowAI and flowCut into your workflow to
help automate and standardize this key step of analysis.
Normalization

Normalization
Tame batch effects and other unwanted signal differences between files in order to improve
comparability for analysis and visualization.
Learn More
Choose the right next steps for you.
Schedule a Demo
Get in contact
with our team to schedule a demo of the OMIQ platform
Try OMIQ
Register for a free, full-featured trial of OMIQ and learn what's possible today. Use your own data or
follow along with our tutorial and included demo data.
Contact Us